PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g80710
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 242aa    MW: 27783.2 Da    PI: 7.4235
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g80710genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY57.62.5e-18205242137
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEE CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkk 37 
                 ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+
  CA00g80710 205 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQ 242
                 58***************************99******7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.8E-18191242IPR003657WRKY domain
SuperFamilySSF1182901.83E-16198242IPR003657WRKY domain
PROSITE profilePS5081118.911200242IPR003657WRKY domain
SMARTSM007742.3E-8205242IPR003657WRKY domain
PfamPF031061.2E-15206242IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MIFIFQFSKK RELHEDHKSK SSQLQKDYLT SDKEDDQLES AKADMEEVME ENQRLKKHLD  60
RVMKDYQNLQ MQFQEISQRG VEKSNNVKHD EAELVSLSLG RTSSDTKIEL SKILNKKENV  120
EEEDNLTLGL DCKFQSSANA PTKSSPSNLS PENSLGEVKD EKGTETWPAH KGLKTIRDEE  180
DDVVQQNPTK RAKVSVRIRC DTPTMNDGCQ WRKYGQKIAK GNPCPRAYYR CTVAPSCPVR  240
KQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001234802.21e-127transcription factor WRKY72
TrEMBLK4BKG51e-128K4BKG5_SOLLC; Uncharacterized protein
STRINGSolyc03g113120.2.11e-127(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19452464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.15e-46WRKY DNA-binding protein 72